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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912095.1_cds_XP_016462120.1_55379
CDS Infomation

[gene=LOC107785349] [db_xref=GeneID:107785349] [protein=polygalacturonase-like] [protein_id=XP_016462120.1] [location=join(36171..36623,37145..37434,38002..38230,38325..38546)] [gbkey=CDS]
Sequence

ATGAGGAAAATGAGTTTACTAGAAAACCTCCCACTTTTTTTCACAATCTTGTTCTTGATC
TTAAACTCTTCCATTGCTGCAAATGCAATATATAATGTCAAAAACTATGGAGCAAAATCC
AATGGAAAAATCGATTCATCCAAAGCTTTTCTGAGTGCATGGGCTGCAGCATGTGCATCT
ACTAGCCCTGCCACCATTTACGTGCCAAAGGGAAGTTACTTGCTTAAAAGTGCATATTTT
CAAGGTGAAACATGCAAGAGCAAGGCTATTACCTTACACATTGATGGCACTATATTAGCT
CCATCGGATTATAATGCCAATCGGAATGAAGAAAATTGGATGAAATTTGAAAGAGTCACT
GGAGTTTCCATATATGGTGGAACCTTAGATGGACAAGGTGCTAGTCTTTGGGCTTGCAAA
ACCTCTAGCAAGAATTGTCCTCAAGGAACAATGGGACTTACTTTTTCCAACTCCAGCAAC
ATAGATATAAGCGGATTAACATCGAAAAACAGCCAAATGTTCCACATATTGGTAGATAAT
TGTGATAATGTGAAGCTACAAGGAGTAAAGGTATCAGCTCCAGGAAACAGTCCCAACACC
GATGGTATTCACGTCCAATATTCGTCTAAAGTCACCATTATGAACTCCCATATTGGAACT
GGAGATGATTGTATCTCAATTGGCCCTGGAACCTCCAACTTATGGATTGAAAACATTGCC
TGTGGCCCTGGCCATGGAATAAGCATTGGAAGTTTAGGCTGGGAACTAGAAGAGCCTGGA
GTTCAAAATGTTACAGTTAAAACAGTCACGTTCAGTGGAACACAAAATGGATTGAGAGTA
AAAACATGGGCAAGATCAAGCAATGGCTTCGTCAAAAATGTTCTCTTCCAGCATATAGTT
ATGGCTAACGTTCAAAACCCTATCATTATAGACCAAAATTATTGCCCTAACAATGAAAAT
TGCCCTCATCAGGGCTCGGGTGTGAAAATCAGCAACGTAAAGTATCAGGACATACGCGGT
ACATCTGCTACGGAAGTTGCAGTGAAATTTGATTGTAGCAAAAAATATCCATGCAGTGGC
ATATCAATAGAAGATGTAAATCTTAGCTATAGAGATCAACCCGCTGAAGCTTCTTGTGTT
AATGCTGGAGGAAGAGCTTCTGGTTCTGTAAAACAAACTAGTTGCTTAGGTTAG

Peptide Sequence

PEP ID

XP_016462120.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MRKMSLLENLPLFFTILFLILNSSIAANAIYNVKNYGAKSNGKIDSSKAFLSAWAAACAS
TSPATIYVPKGSYLLKSAYFQGETCKSKAITLHIDGTILAPSDYNANRNEENWMKFERVT
GVSIYGGTLDGQGASLWACKTSSKNCPQGTMGLTFSNSSNIDISGLTSKNSQMFHILVDN
CDNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIMNSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWELEEPGVQNVTVKTVTFSGTQNGLRVKTWARSSNGFVKNVLFQHIV
MANVQNPIIIDQNYCPNNENCPHQGSGVKISNVKYQDIRGTSATEVAVKFDCSKKYPCSG
ISIEDVNLSYRDQPAEASCVNAGGRASGSVKQTSCLG

Transcript Sequence

Gene sequence data has not been registered.